Is your target application HFM or Essbase in your setup?
When you have control tables issue it is one of a few thins:
1) User does not have provisioning to target application (HFM/Essbase)
2) The FDQM application is not setup properly to point to a valid target application
3) The Machine profile is setup incorrectly and not pointing to a valid Server/Cluster for target application.
Update: I see you also asked the same question in the Financial Data Quality Management forum and appear to have resolved by updating your custom dimensions.