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The report has the parameters GL Date From and GL Date To. Don't know which is your case but let's suppose you are getting a difference in the period 01-sep-12 to 30-sep-12. Run the report for a shorter period, let's say 01-sep to 15-sep and see if the difference remains. If yes, run it for a shorter period within this one until you get the exact period where the difference occurs. Then you can identify which transactions are causing the difference.