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Actually, when you have schema definitions on a master server which are not defined in the 99user.ldif file, these definitions will be replicated but they'll end up in the 99user.ldif in the target server.
Any user-defined schema ends up in that file on target servers. So, if you want to keep the things consistent and have the same schema files on each server you have 2 choices:
- add your own schema to 99user.ldif on the 1st master and let the directory server do the replication job.
- use your own schema files, and manually copy the files everywhere, which is not recommanded or even supported, possibly. Moreover, you may have pain to maintain
such a way to work.