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Unfortunately, the jquery ui styles you see in the Theme 25 stylesheet are strictly for styling the jquery UI components (date pickers, item help, etc). The theme itself cannot be styled using that themeroller.
However, if you want to change the Theme's colors, you can do so by overriding the theme's stylesheet and providing styles with your colors. You can use firebug or web inspector to determine which styles / classes of the themes you would like to change, and then define styles to override them. You can then use [this css gradient generator|http://www.colorzilla.com/gradient-editor/] to create your gradients that match your company's color scheme.