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Post the source code of the copy operation here... So we can see it... Better if you also post sample input and expected output...
i assume you're using a xslt transformation (since you're mapping 442 elements)
are you using copy-of in the xslt with a template to 'copy' the whole input to the output?
you could add an extra constraint in there to check with something like string-length(.) > 0 then copy-of
so you only copy element nodes which contain data