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Thanks for reply.
I am not sure I got what you meant when you mentioned "Update the deployer". But for my knowledge if you delete from the temp folder it will be created again might be with same/diff name when you redeploy it.
When I went a bit deep into it, I came to know that auto-deployment takes places in development mode. So if your web logic is running whatever modifications you do will be displayed in the console.
To avoid this, you can undeploy or redeploy(guess this is what you mentioned) an application by using weblogic command
From this thread it looks you are using auto-deployment functionality.
Anything a war, ear or an exploded application if deployed from $WL_HOME/autodeploy admin server keeps a watch on the file present. Admin server will regularly check the last modification time of war and ear and for exploded app search for a file "redeploy" and if it finds modification time has changed, it will auto-deploy the application.
For detail check http://middlewaresupport.wordpress.com/2013/02/20/understanding-weblogic-deployment-techniques/