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Try the following filter:
root1 != root2
Seems that you can define hasRoot to be an owl:FunctionalProperty
thank you, FunctionalProperty can help here.
I declared hasRoot as functional via triple
<...#hasRoot> rdf:type owl:FunctionalProperty
but the "magic" does not happen - I can see the roots are not merged like it happens with sameAs after inference? At least this is what I expect to happen.
Edited by: GDanov on Mar 26, 2011 9:21 AM
Did you add the 'SAM' component? If you expect many owl:sameAs relationships to be generated, then please use OPT_SAMEAS=T.
Dev guide has details.