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I think this document on support.oracle.com may answer some of your questions:
Document Availability for Point-of-Service User, Developer, and Administrator Guides [ID 399033.1] - The Administrator Guide.
MySQL 4.1.14 and JBoss JMS 4.0.2 are mentioned there.
Edited by: ErikYkema on Oct 25, 2011 2:05 PM
Thanks ... this document for old versions.
Have you seen similar document for 12.X or 13.X release?
No, don't know. It is not on http://www.oracle.com/technetwork/documentation/oracle-retail-100266.html.
I suggest to file a service request at Oracle Support asking for the certification and/or recent Administrator Guide.
That document was during the days when Oracle has not acquired 360 Commerce. For 12x-13x Oracle will not recommend you to install it on any other server than OAS or Weblogic. You have to install it at your own risk and will require little modifications in the settings as well.