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We used IBM DB2Connect software which allows you to use AS400/iSeries native commands. The web developer handled the setup on the application server so I don't have any details on the setup, but your IBM representative should be able to help you or get you in touch with someone who can help you.
World or E1?
World has a "read-only" JDBC driver specific for the Oracle JDE World product that is available on the Oracle JD Edwards EnterpriseOne and World Update Center