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To my knowledge for both the SNMP (log filter) and Diagnostic Modules watch, you can only do this on server logs.
Note also the dropdown box when you configure a watch you can select either: collected metrics, server log or event data.
The same goes for SNMP, where you can configure a log filter, that listens for message from servers.
Maybe you can ask your development team to put the relevant application logs in the server logs (could even by using System.out.println which will end up in the .out files
when the server is started by using the nodemanager)