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If you are talking about configuring the outbound WS , then you need to go to Siebel > Administration-Webservices> Outbound Webservices
Query for webservices there and give the <HOST>:<SOA PORT> in the URL.
Also , you will need to configure your "jndi.properties" file on the Siebel end. This file usually resides under JMS folder in Siebel.