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Strange. One suggestion though. What happens if you omit stype parameter form compiling?
The correct location of rwconverter.sh is ORACLE_INSTANCE/config/reports/bin. So this one should be used.
For future needs:
Location Of Different Reports Configuration Files in Fusion Middleware Forms and Reports 11g Installations (Doc ID 1083666.1)
Your script should look like this:
#UNIX COMPILE REPORTS
for i in `ls *.rdf`
echo Compiling Report $i ...
ORACLE_INSTANCE/config/reports/bin/rwconverter.sh userid=scott/tiger@v11g batch=yes source=$i stype=rdffile dtype=repfile overwrite=yes compile_all=yes
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