Is there a way to perform auto-reconciliation across multi-day bai2 files

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Is there a way to perform auto-reconciliation across multi-day bai2 files

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Client will be paying associates via ACH.  Those payments will show up on the CE side as individual transactions.  However, the BAI2 file from the bank will have summarized totals instead and it will not be all paid on the same day.

Is there a way to perform auto-reconciliation across multi-day bai2 files

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