Preventing partial credits to be applied to supplier payments

 Has anyone successfully prevented the use of a debit memo or credit invoice in a payment batch where the negative amount  exceeded the total amount due to a supplier.?

Example Supplier X has a credit of $200.00 and an invoice for $100.00, we do a payment run and the system pulls a portion of the $200.00 credit against the $100.00 invoice, creating a zero dollar check and leaving a $100.00 on the account.

We would like for the system to only apply the credit once the total amount of invoices exceeds the credit amount.

Will take all suggestions!