Forms 12 Compile Methods Giving Different Results

We are moving from Oracle Forms 11 to Forms 12. We are getting two different results when compiling with frmcmp.sh (GUI) and frmcmp_batch.sh (command line). The frmcmp_batch command gives results similar/same as what we are used to seeing in our Forms 11 production. The frmcmp.sh (GUI) looks like it could be an updated Forms 12 look. When we test, we overwrite the previous FMX with the next one, so the runtime environment is the same. We also have compiled two different forms, one with each method, and then view them in the same session. They are still different. Shouldn’t these