Auto Recon Exceptions - Receivables Deposits

We are currently updating to 9.2 Image 26 from 9.2 Image 11. We use automatic reconciliation and I've noticed that for Receivables Deposits we are seeing a LOT of exceptions when reviewing Auto Recon Exceptions. The majority of exceptions appear to be AMT (Amounts Not Equal). It appears that each deposit transaction on the bank statement is trying to match with each unreconciled system deposit transaction and each one is causing an exception.

Testing with one specific deposit, I noticed that the DEPOSIT_STATUS was not 'C' when I ran the auto recon process the first time, and there were exceptions generated for the bank transaction with each unreconciled system deposit transaction in the range of days from the Day Tolerance set up on the Bank Account Recon Rules. I went in to AR and completed the accounting entries for the deposit, which set DEPOSIT_STATUS = 'C', then I ran the auto recon process for the bank statement with that deposit. Even though there IS now a system transaction that matches the bank transaction,