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OBIEE 11.1.1.9.0 Top Header Section of Theme/Skin Will Not Change.

Hi All,
In my OBIEE Environment (11.1.1.9.0) If I change the skin to Skyros from FusionFX, the top section of the skin does not appear correctly. It seems to keep the formatting and layout of the FusionFX skin.
This is how the Skyros skin should look for reference (image taken from another working environment I have access to)
This is how the same Skyros skin looks in my problem environment...
As you can see, the lower part of the dasboard is fine, it has the blue background, however the top header section is not displaying correctly.
The same happens when I apply a custom skin, the lower 'body' section works and has the 'master.css' propeties applied, but the header seems to source styling from an incorrect location.
I have tried copying the 's_skyros' and 'sk_Skyros' folders from my working environment to the problem but the issue remains.
Any help would be appreciated as to why this is occuring.
Thanks for your time.