R packages installed failed after V607 SampleAPP deployment, any suggestion?

John Miao

R packages installed failed after V607 SampleAPP deployment, any suggestion?

I execute install_sampleapp_R_packages.sh, but got an error while installing arulesviz.

Thanks,

John

 

John Miao

The installation log as below:

Installing package into ‘/app/oracle/db/product/12c/dbhome_1/R/library’
(as ‘lib’ is unspecified)
trying URL 'http://cran.r-project.org/src/contrib/Archive/arulesViz/arulesViz_0.1-8.tar.gz'
Content type 'application/x-gzip' length 742577 bytes (725 Kb)
opened URL
==================================================
downloaded 725 Kb

ERROR: dependencies ‘seriation’, ‘igraph’ are not available for package ‘arulesViz’
* removing ‘/app/oracle/db/product/12c/dbhome_1/R/library/arulesViz’
Warning message:
In install.packages("http://cran.r-project.org/src/contrib/Archive/arulesViz/arulesViz_0.1-8.tar.gz", :
installation of package ‘/tmp/RtmplBKrRL/downloaded_packages/arulesViz_0.1-8.tar.gz’ had non-zero exit status

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> args<- commandArgs(TRUE)
> proxyType=paste(args[1])
> proxy=paste(args[2])
>
> if(is.na(proxy)|| proxy=="NA"){
+     proxy<-read.table("proxy.txt", header=FALSE, sep="=", stringsAsFactors=FALSE)[,2]
+     if(proxy != "http://[proxy-host:proxy-port]"){
+         print("### Using proxy defined in proxy.txt ###")
+         Sys.setenv(http_proxy=proxy) 
+     }else{
+         print("### Proxy is not defined in proxy.txt, ignoring the same ###")
+     }
+ }else{
+         print("### Using proxy provided in command line ###")
+         print(paste("ProxyType", proxyType, sep="="))
+         print(paste("Proxy", proxy, sep="="))
+        
+         if(proxyType == "https"){
+ Sys.setenv(https_proxy=paste("https://",proxy,sep=""))
+         }
+        
+         if(proxyType == "http"){
+ Sys.setenv(http_proxy=paste("http://",proxy,sep=""))
+         }
+ }
Error in if (proxy != "http://[proxy-host:proxy-port]") { :
missing value where TRUE/FALSE needed
Execution halted
Error in library(RCurl) : there is no package called ‘RCurl’
Calls: installpackagecustom -> library
Execution halted

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